TY - JOUR
T1 - Sensitivity improvement for correlations involving arginine side-chain Nε/Hε resonances in multi-dimensional NMR experiments using broadband 15N 180° pulses
AU - Iwahara, Junji
AU - Clore, G. Marius
N1 - Funding Information:
This work was supported by funds from the Intramural Program of the NIH, NIDDK and in part by the AIDS Targeted Antiviral program of the Office of the Director of the NIH (to G.M.C.).
PY - 2006/12
Y1 - 2006/12
N2 - Due to practical limitations in available 15N rf field strength, imperfections in 15N 180° pulses arising from off-resonance effects can result in significant sensitivity loss, even if the chemical shift offset is relatively small. Indeed, in multi-dimensional NMR experiments optimized for protein backbone amide groups, cross-peaks arising from the Arg guanidino 15N (∼85 ppm) are highly attenuated by the presence of multiple INEPT transfer steps. To improve the sensitivity for correlations involving Arg NεHε groups, we have incorporated 15N broadband 180° pulses into 3D 15N-separated NOE-HSQC and HNCACB experiments. Two 15N-WURST pulses incorporated at the INEPT transfer steps of the 3D 15N-separated NOE-HSQC pulse sequence resulted in a ∼1.5-fold increase in sensitivity for the Arg NεHε signals at 800 MHz. For the 3D HNCACB experiment, five 15N Abramovich-Vega pulses were incorporated for broadband inversion and refocusing, and the sensitivity of Arg1 Hε-15Nε-13Cγ/13Cδ correlation peaks was enhanced by a factor of ∼1.7 at 500 MHz. These experiments eliminate the necessity for additional experiments to assign Arg 1Hε and 15Nε resonances. In addition, the increased sensitivity afforded for the detection of NOE cross-peaks involving correlations with the 15 Nε/1Hε of Arg in 3D 15N-separated NOE experiments should prove to be very useful for structural analysis of interactions involving Arg side-chains.
AB - Due to practical limitations in available 15N rf field strength, imperfections in 15N 180° pulses arising from off-resonance effects can result in significant sensitivity loss, even if the chemical shift offset is relatively small. Indeed, in multi-dimensional NMR experiments optimized for protein backbone amide groups, cross-peaks arising from the Arg guanidino 15N (∼85 ppm) are highly attenuated by the presence of multiple INEPT transfer steps. To improve the sensitivity for correlations involving Arg NεHε groups, we have incorporated 15N broadband 180° pulses into 3D 15N-separated NOE-HSQC and HNCACB experiments. Two 15N-WURST pulses incorporated at the INEPT transfer steps of the 3D 15N-separated NOE-HSQC pulse sequence resulted in a ∼1.5-fold increase in sensitivity for the Arg NεHε signals at 800 MHz. For the 3D HNCACB experiment, five 15N Abramovich-Vega pulses were incorporated for broadband inversion and refocusing, and the sensitivity of Arg1 Hε-15Nε-13Cγ/13Cδ correlation peaks was enhanced by a factor of ∼1.7 at 500 MHz. These experiments eliminate the necessity for additional experiments to assign Arg 1Hε and 15Nε resonances. In addition, the increased sensitivity afforded for the detection of NOE cross-peaks involving correlations with the 15 Nε/1Hε of Arg in 3D 15N-separated NOE experiments should prove to be very useful for structural analysis of interactions involving Arg side-chains.
KW - Arginine guanidino group
KW - BroadbandN 180 pulse
KW - Off-resonance
KW - Pulse imperfection
KW - Sensitivity improvement
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U2 - 10.1007/s10858-006-9089-7
DO - 10.1007/s10858-006-9089-7
M3 - Article
C2 - 17036160
AN - SCOPUS:33751220835
SN - 0925-2738
VL - 36
SP - 251
EP - 257
JO - Journal of Biomolecular NMR
JF - Journal of Biomolecular NMR
IS - 4
ER -