Analysis on molecular genetic evolution of Banna virus based on the 12th segment

H. Liu; X. Y. Gao; S. H. Fu; M. H. Li; Y. G. Zhai; W. S. Meng; X. X. Sun; H. Y. Wang; Z. Lyu; X. X. Shen; Y. X. Cao; Y. He; G. D. Liang

doi:10.3760/cma.j.issn.0254-6450.2016.09.019

Analysis on molecular genetic evolution of Banna virus based on the 12th segment

H. Liu, X. Y. Gao, S. H. Fu, M. H. Li, Y. G. Zhai, W. S. Meng, X. X. Sun, H. Y. Wang, Z. Lyu, X. X. Shen, Y. X. Cao, Y. He, G. D. Liang

Research output: Contribution to journal › Article › peer-review

Abstract

Objective: To understand the evolution characteristics of Banna viruses (BAVs) isolated worldwide from 1980 to 2012. Methods: In this study, a phylogenetic analysis using Bayesian Markov Chain Monte Carlo simulations was conducted on all available 12th segment of genes of BAVs isolated worldwide from 1980 to 2012 to investigate the evolutionary and epidemiologic dynamics of BAVs. Results: The Bayesian phylogenetic analysis of BAVs revealed that the common ancestor of BAVs appeared 315 (95%HPD: 63-619) years ago. The evolutionary rate of BAV based on the 12th segment gene was estimated to be 2.33×10-3 (95%HPD: 2.84× 10-4-8.52×10-3) substitution per site per year, indicating BAV belong to an emerging arbovirus with rapid evolution. Conclusion: The evolution of emerging BAVs is rapid and the distribution of BAVs has expanded with new variant being detected, so it is necessary to enhance the surveillance to fully understand the natural distribution and pathogenicity of BAVs.

Original language	English (US)
Pages (from-to)	1277-1282
Number of pages	6
Journal	Zhonghua liu xing bing xue za zhi = Zhonghua liuxingbingxue zazhi
Volume	37
Issue number	9
DOIs	https://doi.org/10.3760/cma.j.issn.0254-6450.2016.09.019
State	Published - Sep 10 2016
Externally published	Yes

ASJC Scopus subject areas

General Medicine

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Liu, H., Gao, X. Y., Fu, S. H., Li, M. H., Zhai, Y. G., Meng, W. S., Sun, X. X., Wang, H. Y., Lyu, Z., Shen, X. X., Cao, Y. X., He, Y., & Liang, G. D. (2016). Analysis on molecular genetic evolution of Banna virus based on the 12th segment. Zhonghua liu xing bing xue za zhi = Zhonghua liuxingbingxue zazhi, 37(9), 1277-1282. https://doi.org/10.3760/cma.j.issn.0254-6450.2016.09.019

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abstract = "Objective: To understand the evolution characteristics of Banna viruses (BAVs) isolated worldwide from 1980 to 2012. Methods: In this study, a phylogenetic analysis using Bayesian Markov Chain Monte Carlo simulations was conducted on all available 12th segment of genes of BAVs isolated worldwide from 1980 to 2012 to investigate the evolutionary and epidemiologic dynamics of BAVs. Results: The Bayesian phylogenetic analysis of BAVs revealed that the common ancestor of BAVs appeared 315 (95%HPD: 63-619) years ago. The evolutionary rate of BAV based on the 12th segment gene was estimated to be 2.33×10-3 (95%HPD: 2.84× 10-4-8.52×10-3) substitution per site per year, indicating BAV belong to an emerging arbovirus with rapid evolution. Conclusion: The evolution of emerging BAVs is rapid and the distribution of BAVs has expanded with new variant being detected, so it is necessary to enhance the surveillance to fully understand the natural distribution and pathogenicity of BAVs.",

author = "H. Liu and Gao, {X. Y.} and Fu, {S. H.} and Li, {M. H.} and Zhai, {Y. G.} and Meng, {W. S.} and Sun, {X. X.} and Wang, {H. Y.} and Z. Lyu and Shen, {X. X.} and Cao, {Y. X.} and Y. He and Liang, {G. D.}",

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doi = "10.3760/cma.j.issn.0254-6450.2016.09.019",

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AU - Zhai, Y. G.

AU - Meng, W. S.

AU - Sun, X. X.

AU - Wang, H. Y.

AU - Lyu, Z.

AU - Shen, X. X.

AU - Cao, Y. X.

AU - He, Y.

AU - Liang, G. D.

PY - 2016/9/10

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AB - Objective: To understand the evolution characteristics of Banna viruses (BAVs) isolated worldwide from 1980 to 2012. Methods: In this study, a phylogenetic analysis using Bayesian Markov Chain Monte Carlo simulations was conducted on all available 12th segment of genes of BAVs isolated worldwide from 1980 to 2012 to investigate the evolutionary and epidemiologic dynamics of BAVs. Results: The Bayesian phylogenetic analysis of BAVs revealed that the common ancestor of BAVs appeared 315 (95%HPD: 63-619) years ago. The evolutionary rate of BAV based on the 12th segment gene was estimated to be 2.33×10-3 (95%HPD: 2.84× 10-4-8.52×10-3) substitution per site per year, indicating BAV belong to an emerging arbovirus with rapid evolution. Conclusion: The evolution of emerging BAVs is rapid and the distribution of BAVs has expanded with new variant being detected, so it is necessary to enhance the surveillance to fully understand the natural distribution and pathogenicity of BAVs.

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Analysis on molecular genetic evolution of Banna virus based on the 12th segment

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